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Bookmark or Share- TISCH1. How did TISCH annotate the cell types? The clusters of malignant cells were determined by combining three approaches. First, we took the cell-type annotations provided by the original studies. Second, we checked the malignant cell makers’ expression distribution from the initial research, such as epithelial markers, EMT genes, if available.
- TISCHDataset Browser. Search by the datasets. For a single dataset, TISCH2 provides meta information, cell-type annotation, expression visualization, differential gene expression, GSEA results, transcription regulator analyses result, and cell-cell interaction results.
- Dataset Browser - tisch.comp-genomics.orgDataset Browser. Search by the datasets. For a single dataset, TISCH2 provides meta information, cell-type annotation, expression visualization, differential gene expression, GSEA results, transcription regulator analyses result, and cell-cell interaction results.
- TISCHWelcome to TISCH2 190 datasets 6,297,320 cells Tumor Immune Single-cell Hub 2 (TISCH2) is a scRNA-seq database focusing on tumor microenvironment (TME).
- TISCHID Dataset Name Species Treatment Patients Cells Platform Pri / Meta PMID; T010008: BRCA_GSE110686: Human: None: 2: 6,035: 10x Genomics: Primary, Metastatic: 29942092 ...
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